huh? Sounds like that should work!
you can also monitor outputs on the skektek branch. That makes debugging this kind of thing a bit quicker & less error-prone.
Just gonna try doing a ‘fake switch’ by plugging in two jack cables to the 2 switches & then touching tip of one to sleeve of the other. This could rule out any incompatibility between your sustain pedal & the hardware.
so just plug a regular 1/4" jack cable into either footswitch socket (with nothing on the other end) - as you plug it in, should bang the output of the FS1/FS2 operators respectively